About Outbreak

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Outbreak simulates disease dynamics under an individually base model of transitions among susceptible, exposed, infectious and recovered individuals. Outbreak provides several options for modes of transmission (random contact within populations, spatially based transmission, contact with environmental sources of disease) and provides options for management through vaccination or culling. The current version 2 of Outbreak was written by Robert Lacy, based on Outbreak version 1 designed by JP Pollak, PS Miller, RC Lacy, L Hungerford, and P Bright.

Outbreak is licensed under a Creative Commons Attribution-NoDerivatives 4.0 International License.

Changelog

Outbreak is constantly changing. We fix bugs when they are identified, although not always immediately if the bug is more of a nuisance (e.g., bad formatting on a screen or output file) rather than something that is causing misleading results. We also add new features and options when we believe that they will be useful to a significant number of users, and when we have the time to add the enhancements. We frequently make small changes to screen lay-outs, screen text, and file formats when we feel that the change will improve the program for users. In the Help menu of the program there is an option to check for any updates that are more recent than the version you are currently using.

Note that we do not guarantee that all changes to the program have been documented here. In particular, we don’t list here many very minor changes made to the interface.

We also cannot guarantee that all bugs in code or errors in algorithms have now been fixed. Reports of apparent bugs can be made at www.vortex10.org/Bug_Reports.aspx . We are very grateful to the many colleagues who have carefully documented and reported apparent bugs. Even when the issue turns out to be a misunderstanding by the user, and not a true bug, we still appreciate the report. (Indeed, we are happier when the problem turns out not to be a bug in the program!)

  • 3 October 2018

    Two new variables were added to those that can be used in functions. When Individual State variables have been defined, DAM1 and SIRE1 can now be used to obtain the IS1 values for the DAM and SIRE (and similarly for DAM2 and SIRE2, …, up to however many ISvars have been defined).

  • 20 September 2018 (version 2.7)

    A fix was made to the Vaccination code to prevent program crashes in some circumstances.

    A fix was made to Removals. Previously a new value entered for proportion of adults removed was ignored.

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